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【问题解决】Ubuntu 安装 SeisSol 依赖 easi 报错解决: undefined reference to `H5free_memory‘

news 2025/9/17 7:18:39

兼职帮客户安装 SeisSol 时问题解决，安装 easi 这个报错卡了很久（搞了一天），记录下，以备后用~

# 编译器问题
root@ubuntu:/opt/easi# make -j install
[  4%] Building CXX object CMakeFiles/easi.dir/src/component/Composite.cpp.o
[  8%] Building CXX object CMakeFiles/easi.dir/src/component/AndersonianStress.cpp.o
[ 12%] Building CXX object CMakeFiles/easi.dir/src/component/AffineMap.cpp.o
[ 16%] Building CXX object CMakeFiles/easi.dir/src/component/ConstantMap.cpp.o
[ 20%] Building CXX object CMakeFiles/easi.dir/src/component/DomainFilter.cpp.o
[ 24%] Building CXX object CMakeFiles/easi.dir/src/component/EvalModel.cpp.o
[ 28%] Building CXX object CMakeFiles/easi.dir/src/component/FunctionMap.cpp.o
[ 32%] Building CXX object CMakeFiles/easi.dir/src/component/LuaMap.cpp.o
[ 36%] Building CXX object CMakeFiles/easi.dir/src/component/LayeredModelBuilder.cpp.o
[ 40%] Building CXX object CMakeFiles/easi.dir/src/component/OptimalStress.cpp.o
[ 44%] Building CXX object CMakeFiles/easi.dir/src/component/PolynomialMap.cpp.o
[ 48%] Building CXX object CMakeFiles/easi.dir/src/component/SCECFile.cpp.o
[ 52%] Building CXX object CMakeFiles/easi.dir/src/component/Special.cpp.o
[ 56%] Building CXX object CMakeFiles/easi.dir/src/component/Switch.cpp.o
[ 60%] Building CXX object CMakeFiles/easi.dir/src/parser/YAMLComponentParsers.cpp.o
[ 64%] Building CXX object CMakeFiles/easi.dir/src/parser/YAMLHelpers.cpp.o
[ 68%] Building CXX object CMakeFiles/easi.dir/src/util/FunctionWrapper.cpp.o
[ 72%] Building CXX object CMakeFiles/easi.dir/src/util/RegularGrid.cpp.o
[ 76%] Building CXX object CMakeFiles/easi.dir/src/Query.cpp.o
[ 80%] Building CXX object CMakeFiles/easi.dir/src/YAMLParser.cpp.o
[ 84%] Building CXX object CMakeFiles/easi.dir/src/component/ASAGI.cpp.o
[ 88%] Building CXX object CMakeFiles/easi.dir/src/util/AsagiReader.cpp.o
[ 92%] Linking CXX static library libeasi.a
[ 92%] Built target easi
[ 96%] Building CXX object CMakeFiles/easicube.dir/tools/easicube.cpp.o
[100%] Linking CXX executable easicube
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `hdf5free':
nc4file.c:(.text+0x1f): undefined reference to `H5free_memory'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `get_netcdf_type':
nc4file.c:(.text+0x83): undefined reference to `H5Tget_class'
/usr/bin/ld: nc4file.c:(.text+0xa8): undefined reference to `H5Tis_variable_str'
/usr/bin/ld: nc4file.c:(.text+0xf6): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0xfd): undefined reference to `H5T_NATIVE_SCHAR_g'
/usr/bin/ld: nc4file.c:(.text+0x10f): undefined reference to `H5Tequal'
/usr/bin/ld: nc4file.c:(.text+0x141): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x148): undefined reference to `H5T_NATIVE_SHORT_g'
/usr/bin/ld: nc4file.c:(.text+0x15a): undefined reference to `H5Tequal'
/usr/bin/ld: nc4file.c:(.text+0x18c): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x193): undefined reference to `H5T_NATIVE_INT_g'
/usr/bin/ld: nc4file.c:(.text+0x1a5): undefined reference to `H5Tequal'
/usr/bin/ld: nc4file.c:(.text+0x1d7): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1de): undefined reference to `H5T_NATIVE_FLOAT_g'
/usr/bin/ld: nc4file.c:(.text+0x1f0): undefined reference to `H5Tequal'
/usr/bin/ld: nc4file.c:(.text+0x222): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x229): undefined reference to `H5T_NATIVE_DOUBLE_g'
/usr/bin/ld: nc4file.c:(.text+0x23b): undefined reference to `H5Tequal'
/usr/bin/ld: nc4file.c:(.text+0x26d): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x274): undefined reference to `H5T_NATIVE_UCHAR_g'
/usr/bin/ld: nc4file.c:(.text+0x286): undefined reference to `H5Tequal'
/usr/bin/ld: nc4file.c:(.text+0x2b8): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x2bf): undefined reference to `H5T_NATIVE_USHORT_g'
/usr/bin/ld: nc4file.c:(.text+0x2d1): undefined reference to `H5Tequal'
/usr/bin/ld: nc4file.c:(.text+0x303): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x30a): undefined reference to `H5T_NATIVE_UINT_g'
/usr/bin/ld: nc4file.c:(.text+0x31c): undefined reference to `H5Tequal'
/usr/bin/ld: nc4file.c:(.text+0x34e): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x355): undefined reference to `H5T_NATIVE_LLONG_g'
/usr/bin/ld: nc4file.c:(.text+0x367): undefined reference to `H5Tequal'
/usr/bin/ld: nc4file.c:(.text+0x399): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x3a0): undefined reference to `H5T_NATIVE_ULLONG_g'
/usr/bin/ld: nc4file.c:(.text+0x3b2): undefined reference to `H5Tequal'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `read_hdf5_att':
nc4file.c:(.text+0x4c6): undefined reference to `H5Aget_type'
/usr/bin/ld: nc4file.c:(.text+0x4ec): undefined reference to `H5Tget_native_type'
/usr/bin/ld: nc4file.c:(.text+0x526): undefined reference to `H5Tget_class'
/usr/bin/ld: nc4file.c:(.text+0x554): undefined reference to `H5Tis_variable_str'
/usr/bin/ld: nc4file.c:(.text+0x56f): undefined reference to `H5Tget_size'
/usr/bin/ld: nc4file.c:(.text+0x5c8): undefined reference to `H5Aget_space'
/usr/bin/ld: nc4file.c:(.text+0x5eb): undefined reference to `H5Sget_simple_extent_ndims'
/usr/bin/ld: nc4file.c:(.text+0x60c): undefined reference to `H5Sget_simple_extent_npoints'
/usr/bin/ld: nc4file.c:(.text+0x67a): undefined reference to `H5Tget_size'
/usr/bin/ld: nc4file.c:(.text+0x6cd): undefined reference to `H5Sget_simple_extent_type'
/usr/bin/ld: nc4file.c:(.text+0x71c): undefined reference to `H5Sget_simple_extent_dims'
/usr/bin/ld: nc4file.c:(.text+0x7ee): undefined reference to `H5Aread'
/usr/bin/ld: nc4file.c:(.text+0x8b0): undefined reference to `H5Aread'
/usr/bin/ld: nc4file.c:(.text+0x9a9): undefined reference to `H5Aread'
/usr/bin/ld: nc4file.c:(.text+0xa28): undefined reference to `H5Aread'
/usr/bin/ld: nc4file.c:(.text+0xa41): undefined reference to `H5Tclose'
/usr/bin/ld: nc4file.c:(.text+0xa5a): undefined reference to `H5Sclose'
/usr/bin/ld: nc4file.c:(.text+0xa79): undefined reference to `H5Tclose'
/usr/bin/ld: nc4file.c:(.text+0xa97): undefined reference to `H5Sclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `att_read_var_callbk':
nc4file.c:(.text+0xb65): undefined reference to `H5Aopen'
/usr/bin/ld: nc4file.c:(.text+0xc61): undefined reference to `H5Aclose'
/usr/bin/ld: nc4file.c:(.text+0xc8d): undefined reference to `H5Aclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `sync_netcdf4_file':
nc4file.c:(.text+0xdcb): undefined reference to `H5Fflush'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `close_netcdf4_file':
nc4file.c:(.text+0xf2c): undefined reference to `H5Fclose'
/usr/bin/ld: nc4file.c:(.text+0xf45): undefined reference to `H5Fget_obj_count'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `nc4_create_file':
nc4file.c:(.text+0x1227): undefined reference to `H5check_version'
/usr/bin/ld: nc4file.c:(.text+0x122c): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1253): undefined reference to `H5check_version'
/usr/bin/ld: nc4file.c:(.text+0x1258): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1275): undefined reference to `H5check_version'
/usr/bin/ld: nc4file.c:(.text+0x127a): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1341): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1348): undefined reference to `H5P_CLS_FILE_ACCESS_ID_g'
/usr/bin/ld: nc4file.c:(.text+0x1353): undefined reference to `H5Pcreate'
/usr/bin/ld: nc4file.c:(.text+0x137b): undefined reference to `H5Pset_fclose_degree'
/usr/bin/ld: nc4file.c:(.text+0x13d2): undefined reference to `H5Pset_fapl_mpio'
/usr/bin/ld: nc4file.c:(.text+0x146b): undefined reference to `H5Pset_libver_bounds'
/usr/bin/ld: nc4file.c:(.text+0x1480): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1487): undefined reference to `H5P_CLS_FILE_CREATE_ID_g'
/usr/bin/ld: nc4file.c:(.text+0x1492): undefined reference to `H5Pcreate'
/usr/bin/ld: nc4file.c:(.text+0x14ba): undefined reference to `H5Pset_obj_track_times'
/usr/bin/ld: nc4file.c:(.text+0x14db): undefined reference to `H5Pset_link_creation_order'
/usr/bin/ld: nc4file.c:(.text+0x14fc): undefined reference to `H5Pset_attr_creation_order'
/usr/bin/ld: nc4file.c:(.text+0x151d): undefined reference to `H5Pset_all_coll_metadata_ops'
/usr/bin/ld: nc4file.c:(.text+0x152e): undefined reference to `H5Pset_coll_metadata_write'
/usr/bin/ld: nc4file.c:(.text+0x1545): undefined reference to `H5Fcreate'
/usr/bin/ld: nc4file.c:(.text+0x158d): undefined reference to `H5Gopen2'
/usr/bin/ld: nc4file.c:(.text+0x15af): undefined reference to `H5Pclose'
/usr/bin/ld: nc4file.c:(.text+0x15bf): undefined reference to `H5Pclose'
/usr/bin/ld: nc4file.c:(.text+0x1648): undefined reference to `H5Pclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `read_scale':
nc4file.c:(.text+0x18e9): undefined reference to `H5Aexists'
/usr/bin/ld: nc4file.c:(.text+0x192d): undefined reference to `H5Aopen_name'
/usr/bin/ld: nc4file.c:(.text+0x195d): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1964): undefined reference to `H5T_NATIVE_INT_g'
/usr/bin/ld: nc4file.c:(.text+0x197c): undefined reference to `H5Aread'
/usr/bin/ld: nc4file.c:(.text+0x1ae5): undefined reference to `H5DSget_scale_name'
/usr/bin/ld: nc4file.c:(.text+0x1ba6): undefined reference to `H5Iinc_ref'
/usr/bin/ld: nc4file.c:(.text+0x1bd6): undefined reference to `H5Aclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `read_coord_dimids':
nc4file.c:(.text+0x1ca2): undefined reference to `H5Aopen_name'
/usr/bin/ld: nc4file.c:(.text+0x1cc3): undefined reference to `H5Aget_type'
/usr/bin/ld: nc4file.c:(.text+0x1ce4): undefined reference to `H5Aget_space'
/usr/bin/ld: nc4file.c:(.text+0x1d05): undefined reference to `H5Sget_simple_extent_npoints'
/usr/bin/ld: nc4file.c:(.text+0x1d4e): undefined reference to `H5Aread'
/usr/bin/ld: nc4file.c:(.text+0x1dbd): undefined reference to `H5Sclose'
/usr/bin/ld: nc4file.c:(.text+0x1dd8): undefined reference to `H5Tclose'
/usr/bin/ld: nc4file.c:(.text+0x1df3): undefined reference to `H5Aclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `dimscale_visitor':
nc4file.c:(.text+0x1e58): undefined reference to `H5Gget_objinfo'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `get_type_info2':
nc4file.c:(.text+0x1f18): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1f1f): undefined reference to `H5T_NATIVE_SCHAR_g'
/usr/bin/ld: nc4file.c:(.text+0x1f2e): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1f35): undefined reference to `H5T_NATIVE_SHORT_g'
/usr/bin/ld: nc4file.c:(.text+0x1f44): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1f4b): undefined reference to `H5T_NATIVE_INT_g'
/usr/bin/ld: nc4file.c:(.text+0x1f5a): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1f61): undefined reference to `H5T_NATIVE_FLOAT_g'
/usr/bin/ld: nc4file.c:(.text+0x1f70): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1f77): undefined reference to `H5T_NATIVE_DOUBLE_g'
/usr/bin/ld: nc4file.c:(.text+0x1f86): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1f8d): undefined reference to `H5T_NATIVE_UCHAR_g'
/usr/bin/ld: nc4file.c:(.text+0x1f9c): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1fa3): undefined reference to `H5T_NATIVE_USHORT_g'
/usr/bin/ld: nc4file.c:(.text+0x1fb2): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1fb9): undefined reference to `H5T_NATIVE_UINT_g'
/usr/bin/ld: nc4file.c:(.text+0x1fc8): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1fcf): undefined reference to `H5T_NATIVE_LLONG_g'
/usr/bin/ld: nc4file.c:(.text+0x1fde): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x1fe5): undefined reference to `H5T_NATIVE_ULLONG_g'
/usr/bin/ld: nc4file.c:(.text+0x1ffb): undefined reference to `H5Dget_type'
/usr/bin/ld: nc4file.c:(.text+0x2021): undefined reference to `H5Tget_native_type'
/usr/bin/ld: nc4file.c:(.text+0x2042): undefined reference to `H5Tget_class'
/usr/bin/ld: nc4file.c:(.text+0x20ac): undefined reference to `H5Tis_variable_str'
/usr/bin/ld: nc4file.c:(.text+0x20d1): undefined reference to `H5Tget_size'
/usr/bin/ld: nc4file.c:(.text+0x214b): undefined reference to `H5Tequal'
/usr/bin/ld: nc4file.c:(.text+0x217d): undefined reference to `H5Tget_order'
/usr/bin/ld: nc4file.c:(.text+0x22cf): undefined reference to `H5Tclose'
/usr/bin/ld: nc4file.c:(.text+0x22e6): undefined reference to `H5Tclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `read_type':
nc4file.c:(.text+0x23be): undefined reference to `H5Tget_native_type'
/usr/bin/ld: nc4file.c:(.text+0x23e8): undefined reference to `H5Tget_size'
/usr/bin/ld: nc4file.c:(.text+0x2474): undefined reference to `H5Iinc_ref'
/usr/bin/ld: nc4file.c:(.text+0x2495): undefined reference to `H5Tget_class'
/usr/bin/ld: nc4file.c:(.text+0x251e): undefined reference to `H5Tget_nmembers'
/usr/bin/ld: nc4file.c:(.text+0x2561): undefined reference to `H5Tget_member_type'
/usr/bin/ld: nc4file.c:(.text+0x2590): undefined reference to `H5Tget_native_type'
/usr/bin/ld: nc4file.c:(.text+0x25c6): undefined reference to `H5Tget_member_name'
/usr/bin/ld: nc4file.c:(.text+0x2618): undefined reference to `H5Tget_member_offset'
/usr/bin/ld: nc4file.c:(.text+0x262e): undefined reference to `H5Tget_class'
/usr/bin/ld: nc4file.c:(.text+0x2663): undefined reference to `H5Tget_array_ndims'
/usr/bin/ld: nc4file.c:(.text+0x269f): undefined reference to `H5Tget_array_dims1'
/usr/bin/ld: nc4file.c:(.text+0x2707): undefined reference to `H5Tget_super'
/usr/bin/ld: nc4file.c:(.text+0x274f): undefined reference to `H5Tget_super'
/usr/bin/ld: nc4file.c:(.text+0x2761): undefined reference to `H5Tget_super'
/usr/bin/ld: nc4file.c:(.text+0x28db): undefined reference to `H5Tis_variable_str'
/usr/bin/ld: nc4file.c:(.text+0x2937): undefined reference to `H5Tget_super'
/usr/bin/ld: nc4file.c:(.text+0x2961): undefined reference to `H5Tget_size'
/usr/bin/ld: nc4file.c:(.text+0x2a26): undefined reference to `H5Tget_super'
/usr/bin/ld: nc4file.c:(.text+0x2a50): undefined reference to `H5Tget_size'
/usr/bin/ld: nc4file.c:(.text+0x2ae1): undefined reference to `H5Tget_nmembers'
/usr/bin/ld: nc4file.c:(.text+0x2b4a): undefined reference to `H5Tget_member_name'
/usr/bin/ld: nc4file.c:(.text+0x2bae): undefined reference to `H5Tget_member_value'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `read_var':
nc4file.c:(.text+0x2dd9): undefined reference to `H5Iinc_ref'
/usr/bin/ld: nc4file.c:(.text+0x2eb5): undefined reference to `H5Dget_access_plist'
/usr/bin/ld: nc4file.c:(.text+0x2f0d): undefined reference to `H5Pget_chunk_cache'
/usr/bin/ld: nc4file.c:(.text+0x30ce): undefined reference to `H5Dget_create_plist'
/usr/bin/ld: nc4file.c:(.text+0x30fd): undefined reference to `H5Pget_layout'
/usr/bin/ld: nc4file.c:(.text+0x3143): undefined reference to `H5Pget_chunk'
/usr/bin/ld: nc4file.c:(.text+0x3217): undefined reference to `H5Pget_nfilters'
/usr/bin/ld: nc4file.c:(.text+0x327c): undefined reference to `H5Pget_filter2'
/usr/bin/ld: nc4file.c:(.text+0x341b): undefined reference to `H5Pget_filter2'
/usr/bin/ld: nc4file.c:(.text+0x34bf): undefined reference to `H5Pfill_value_defined'
/usr/bin/ld: nc4file.c:(.text+0x361f): undefined reference to `H5Pget_fill_value'
/usr/bin/ld: nc4file.c:(.text+0x377a): undefined reference to `H5DSget_num_scales'
/usr/bin/ld: nc4file.c:(.text+0x387e): undefined reference to `H5DSiterate_scales'
/usr/bin/ld: nc4file.c:(.text+0x3920): undefined reference to `H5Aiterate2'
/usr/bin/ld: nc4file.c:(.text+0x39a8): undefined reference to `H5Idec_ref'
/usr/bin/ld: nc4file.c:(.text+0x39f8): undefined reference to `H5Pclose'
/usr/bin/ld: nc4file.c:(.text+0x3a1f): undefined reference to `H5Pclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `read_grp_atts':
nc4file.c:(.text+0x3aa5): undefined reference to `H5Aget_num_attrs'
/usr/bin/ld: nc4file.c:(.text+0x3adc): undefined reference to `H5Aopen_idx'
/usr/bin/ld: nc4file.c:(.text+0x3b17): undefined reference to `H5Aget_name'
/usr/bin/ld: nc4file.c:(.text+0x3da2): undefined reference to `H5Aclose'
/usr/bin/ld: nc4file.c:(.text+0x3deb): undefined reference to `H5Aclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `read_dataset':
nc4file.c:(.text+0x3e82): undefined reference to `H5Dget_space'
/usr/bin/ld: nc4file.c:(.text+0x3eb1): undefined reference to `H5Sget_simple_extent_ndims'
/usr/bin/ld: nc4file.c:(.text+0x3ede): undefined reference to `H5DSis_scale'
/usr/bin/ld: nc4file.c:(.text+0x3f29): undefined reference to `H5Sget_simple_extent_dims'
/usr/bin/ld: nc4file.c:(.text+0x4011): undefined reference to `H5Sclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `nc4_rec_read_metadata_cb':
nc4file.c:(.text+0x41bf): undefined reference to `H5Oopen'
/usr/bin/ld: nc4file.c:(.text+0x420d): undefined reference to `H5Gget_objinfo'
/usr/bin/ld: nc4file.c:(.text+0x4313): undefined reference to `H5Oclose'
/usr/bin/ld: nc4file.c:(.text+0x436a): undefined reference to `H5Oclose'
/usr/bin/ld: nc4file.c:(.text+0x43b1): undefined reference to `H5Oclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `nc4_rec_read_metadata':
nc4file.c:(.text+0x44ac): undefined reference to `H5Gopen2'
/usr/bin/ld: nc4file.c:(.text+0x44f0): undefined reference to `H5Gopen2'
/usr/bin/ld: nc4file.c:(.text+0x4556): undefined reference to `H5Gget_create_plist'
/usr/bin/ld: nc4file.c:(.text+0x456d): undefined reference to `H5Pget_link_creation_order'
/usr/bin/ld: nc4file.c:(.text+0x4579): undefined reference to `H5Pclose'
/usr/bin/ld: nc4file.c:(.text+0x45fb): undefined reference to `H5Literate'
/usr/bin/ld: nc4file.c:(.text+0x469e): undefined reference to `H5Oclose'
/usr/bin/ld: nc4file.c:(.text+0x4757): undefined reference to `H5Oclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4file.o): in function `nc4_open_file':
nc4file.c:(.text+0x47e6): undefined reference to `H5check_version'
/usr/bin/ld: nc4file.c:(.text+0x47eb): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x4806): undefined reference to `H5check_version'
/usr/bin/ld: nc4file.c:(.text+0x480b): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x48f2): undefined reference to `H5open'
/usr/bin/ld: nc4file.c:(.text+0x48f9): undefined reference to `H5P_CLS_FILE_ACCESS_ID_g'
/usr/bin/ld: nc4file.c:(.text+0x4904): undefined reference to `H5Pcreate'
/usr/bin/ld: nc4file.c:(.text+0x492c): undefined reference to `H5Pset_fclose_degree'
/usr/bin/ld: nc4file.c:(.text+0x498a): undefined reference to `H5Pset_fapl_mpio'
/usr/bin/ld: nc4file.c:(.text+0x4a2e): undefined reference to `H5Pset_all_coll_metadata_ops'
/usr/bin/ld: nc4file.c:(.text+0x4a53): undefined reference to `H5LTopen_file_image'
/usr/bin/ld: nc4file.c:(.text+0x4a96): undefined reference to `H5Fopen'
/usr/bin/ld: nc4file.c:(.text+0x4b07): undefined reference to `H5Pclose'
/usr/bin/ld: nc4file.c:(.text+0x4b72): undefined reference to `H5Pclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4grp.o): in function `NC4_rename_grp':
nc4grp.c:(.text+0x3a0): undefined reference to `H5Gclose'
/usr/bin/ld: nc4grp.c:(.text+0x3fd): undefined reference to `H5Gmove'
/usr/bin/ld: nc4grp.c:(.text+0x438): undefined reference to `H5Gopen2'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `rec_reattach_scales.localalias':
nc4hdf.c:(.text+0x17e): undefined reference to `H5DSattach_scale'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `rec_detach_scales.localalias':
nc4hdf.c:(.text+0x342): undefined reference to `H5DSdetach_scale'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `nc4_open_var_grp2':
nc4hdf.c:(.text+0x469): undefined reference to `H5Dopen2'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `nc4_get_hdf_typeid':
nc4hdf.c:(.text+0x8e8): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x8ef): undefined reference to `H5T_C_S1_g'
/usr/bin/ld: nc4hdf.c:(.text+0x8fa): undefined reference to `H5Tcopy'
/usr/bin/ld: nc4hdf.c:(.text+0x920): undefined reference to `H5Tset_strpad'
/usr/bin/ld: nc4hdf.c:(.text+0x941): undefined reference to `H5Tset_cset'
/usr/bin/ld: nc4hdf.c:(.text+0x96e): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x975): undefined reference to `H5T_C_S1_g'
/usr/bin/ld: nc4hdf.c:(.text+0x980): undefined reference to `H5Tcopy'
/usr/bin/ld: nc4hdf.c:(.text+0x9a8): undefined reference to `H5Tset_size'
/usr/bin/ld: nc4hdf.c:(.text+0x9c9): undefined reference to `H5Tset_cset'
/usr/bin/ld: nc4hdf.c:(.text+0xa2a): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xa31): undefined reference to `H5T_STD_I8LE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xa48): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xa4f): undefined reference to `H5T_STD_I8BE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xa60): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xa67): undefined reference to `H5T_NATIVE_SCHAR_g'
/usr/bin/ld: nc4hdf.c:(.text+0xa7e): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xa85): undefined reference to `H5T_STD_I16LE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xa9c): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xaa3): undefined reference to `H5T_STD_I16BE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xab4): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xabb): undefined reference to `H5T_NATIVE_SHORT_g'
/usr/bin/ld: nc4hdf.c:(.text+0xad2): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xad9): undefined reference to `H5T_STD_I32LE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xaf0): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xaf7): undefined reference to `H5T_STD_I32BE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xb08): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xb0f): undefined reference to `H5T_NATIVE_INT_g'
/usr/bin/ld: nc4hdf.c:(.text+0xb26): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xb2d): undefined reference to `H5T_STD_U8LE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xb44): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xb4b): undefined reference to `H5T_STD_U8BE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xb5c): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xb63): undefined reference to `H5T_NATIVE_UCHAR_g'
/usr/bin/ld: nc4hdf.c:(.text+0xb7a): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xb81): undefined reference to `H5T_STD_U16LE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xb98): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xb9f): undefined reference to `H5T_STD_U16BE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xbb0): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xbb7): undefined reference to `H5T_NATIVE_USHORT_g'
/usr/bin/ld: nc4hdf.c:(.text+0xbce): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xbd5): undefined reference to `H5T_STD_U32LE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xbec): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xbf3): undefined reference to `H5T_STD_U32BE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xc04): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xc0b): undefined reference to `H5T_NATIVE_UINT_g'
/usr/bin/ld: nc4hdf.c:(.text+0xc22): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xc29): undefined reference to `H5T_STD_I64LE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xc40): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xc47): undefined reference to `H5T_STD_I64BE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xc58): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xc5f): undefined reference to `H5T_NATIVE_LLONG_g'
/usr/bin/ld: nc4hdf.c:(.text+0xc76): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xc7d): undefined reference to `H5T_STD_U64LE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xc94): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xc9b): undefined reference to `H5T_STD_U64BE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xcac): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xcb3): undefined reference to `H5T_NATIVE_ULLONG_g'
/usr/bin/ld: nc4hdf.c:(.text+0xcca): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xcd1): undefined reference to `H5T_IEEE_F32LE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xce8): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xcef): undefined reference to `H5T_IEEE_F32BE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xd00): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xd07): undefined reference to `H5T_NATIVE_FLOAT_g'
/usr/bin/ld: nc4hdf.c:(.text+0xd1e): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xd25): undefined reference to `H5T_IEEE_F64LE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xd39): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xd40): undefined reference to `H5T_IEEE_F64BE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xd4e): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0xd55): undefined reference to `H5T_NATIVE_DOUBLE_g'
/usr/bin/ld: nc4hdf.c:(.text+0xddc): undefined reference to `H5Tcopy'
/usr/bin/ld: nc4hdf.c:(.text+0xe46): undefined reference to `H5Tclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `set_par_access':
nc4hdf.c:(.text+0xfc4): undefined reference to `H5Pset_dxpl_mpio'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `nc4_put_vara':
nc4hdf.c:(.text+0x1301): undefined reference to `H5Dopen2'
/usr/bin/ld: nc4hdf.c:(.text+0x132b): undefined reference to `H5Dget_space'
/usr/bin/ld: nc4hdf.c:(.text+0x136b): undefined reference to `H5Sget_simple_extent_dims'
/usr/bin/ld: nc4hdf.c:(.text+0x14c2): undefined reference to `H5Sget_simple_extent_type'
/usr/bin/ld: nc4hdf.c:(.text+0x14d0): undefined reference to `H5Screate'
/usr/bin/ld: nc4hdf.c:(.text+0x1524): undefined reference to `H5Sselect_hyperslab'
/usr/bin/ld: nc4hdf.c:(.text+0x1557): undefined reference to `H5Screate_simple'
/usr/bin/ld: nc4hdf.c:(.text+0x16e0): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x16e7): undefined reference to `H5P_CLS_DATASET_XFER_ID_g'
/usr/bin/ld: nc4hdf.c:(.text+0x16f2): undefined reference to `H5Pcreate'
/usr/bin/ld: nc4hdf.c:(.text+0x1aa0): undefined reference to `H5Dset_extent'
/usr/bin/ld: nc4hdf.c:(.text+0x1acc): undefined reference to `H5Sclose'
/usr/bin/ld: nc4hdf.c:(.text+0x1aed): undefined reference to `H5Dget_space'
/usr/bin/ld: nc4hdf.c:(.text+0x1b3d): undefined reference to `H5Sselect_hyperslab'
/usr/bin/ld: nc4hdf.c:(.text+0x1c1a): undefined reference to `H5Dwrite'
/usr/bin/ld: nc4hdf.c:(.text+0x1cce): undefined reference to `H5Sclose'
/usr/bin/ld: nc4hdf.c:(.text+0x1cf5): undefined reference to `H5Sclose'
/usr/bin/ld: nc4hdf.c:(.text+0x1d1c): undefined reference to `H5Pclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `nc4_get_vara':
nc4hdf.c:(.text+0x20d8): undefined reference to `H5Dopen2'
/usr/bin/ld: nc4hdf.c:(.text+0x2102): undefined reference to `H5Dget_space'
/usr/bin/ld: nc4hdf.c:(.text+0x2142): undefined reference to `H5Sget_simple_extent_dims'
/usr/bin/ld: nc4hdf.c:(.text+0x2548): undefined reference to `H5Sget_simple_extent_type'
/usr/bin/ld: nc4hdf.c:(.text+0x2556): undefined reference to `H5Screate'
/usr/bin/ld: nc4hdf.c:(.text+0x25b2): undefined reference to `H5Sselect_hyperslab'
/usr/bin/ld: nc4hdf.c:(.text+0x25e5): undefined reference to `H5Screate_simple'
/usr/bin/ld: nc4hdf.c:(.text+0x2633): undefined reference to `H5Tget_size'
/usr/bin/ld: nc4hdf.c:(.text+0x2654): undefined reference to `H5Tis_variable_str'
/usr/bin/ld: nc4hdf.c:(.text+0x2673): undefined reference to `H5Tget_size'
/usr/bin/ld: nc4hdf.c:(.text+0x2803): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x280a): undefined reference to `H5P_CLS_DATASET_XFER_ID_g'
/usr/bin/ld: nc4hdf.c:(.text+0x2815): undefined reference to `H5Pcreate'
/usr/bin/ld: nc4hdf.c:(.text+0x28ac): undefined reference to `H5Dread'
/usr/bin/ld: nc4hdf.c:(.text+0x2a3f): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x2a46): undefined reference to `H5P_CLS_DATASET_XFER_ID_g'
/usr/bin/ld: nc4hdf.c:(.text+0x2a51): undefined reference to `H5Pcreate'
/usr/bin/ld: nc4hdf.c:(.text+0x2ab3): undefined reference to `H5Sselect_none'
/usr/bin/ld: nc4hdf.c:(.text+0x2ad9): undefined reference to `H5Dget_space'
/usr/bin/ld: nc4hdf.c:(.text+0x2b08): undefined reference to `H5Sselect_none'
/usr/bin/ld: nc4hdf.c:(.text+0x2b5f): undefined reference to `H5Dread'
/usr/bin/ld: nc4hdf.c:(.text+0x2e05): undefined reference to `H5Sclose'
/usr/bin/ld: nc4hdf.c:(.text+0x2e2c): undefined reference to `H5Sclose'
/usr/bin/ld: nc4hdf.c:(.text+0x2e53): undefined reference to `H5Pclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `put_att_grpa':
nc4hdf.c:(.text+0x3049): undefined reference to `H5Aexists'
/usr/bin/ld: nc4hdf.c:(.text+0x307b): undefined reference to `H5Adelete'
/usr/bin/ld: nc4hdf.c:(.text+0x314b): undefined reference to `H5Screate'
/usr/bin/ld: nc4hdf.c:(.text+0x316c): undefined reference to `H5Screate'
/usr/bin/ld: nc4hdf.c:(.text+0x3196): undefined reference to `H5Tset_size'
/usr/bin/ld: nc4hdf.c:(.text+0x31b7): undefined reference to `H5Tset_strpad'
/usr/bin/ld: nc4hdf.c:(.text+0x31dc): undefined reference to `H5Screate'
/usr/bin/ld: nc4hdf.c:(.text+0x3209): undefined reference to `H5Screate_simple'
/usr/bin/ld: nc4hdf.c:(.text+0x323f): undefined reference to `H5Acreate1'
/usr/bin/ld: nc4hdf.c:(.text+0x326a): undefined reference to `H5Awrite'
/usr/bin/ld: nc4hdf.c:(.text+0x3293): undefined reference to `H5Tclose'
/usr/bin/ld: nc4hdf.c:(.text+0x32b1): undefined reference to `H5Aclose'
/usr/bin/ld: nc4hdf.c:(.text+0x32cf): undefined reference to `H5Sclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `write_coord_dimids':
nc4hdf.c:(.text+0x33ca): undefined reference to `H5Screate_simple'
/usr/bin/ld: nc4hdf.c:(.text+0x33e4): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x33eb): undefined reference to `H5T_NATIVE_INT_g'
/usr/bin/ld: nc4hdf.c:(.text+0x340f): undefined reference to `H5Acreate1'
/usr/bin/ld: nc4hdf.c:(.text+0x3431): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x3438): undefined reference to `H5T_NATIVE_INT_g'
/usr/bin/ld: nc4hdf.c:(.text+0x344d): undefined reference to `H5Awrite'
/usr/bin/ld: nc4hdf.c:(.text+0x3468): undefined reference to `H5Sclose'
/usr/bin/ld: nc4hdf.c:(.text+0x3483): undefined reference to `H5Aclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `write_netcdf4_dimid':
nc4hdf.c:(.text+0x34d4): undefined reference to `H5Screate'
/usr/bin/ld: nc4hdf.c:(.text+0x34ff): undefined reference to `H5Aexists'
/usr/bin/ld: nc4hdf.c:(.text+0x353d): undefined reference to `H5Aopen_by_name'
/usr/bin/ld: nc4hdf.c:(.text+0x3548): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x354f): undefined reference to `H5T_NATIVE_INT_g'
/usr/bin/ld: nc4hdf.c:(.text+0x356f): undefined reference to `H5Acreate1'
/usr/bin/ld: nc4hdf.c:(.text+0x3586): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x358d): undefined reference to `H5T_NATIVE_INT_g'
/usr/bin/ld: nc4hdf.c:(.text+0x35a3): undefined reference to `H5Awrite'
/usr/bin/ld: nc4hdf.c:(.text+0x35ba): undefined reference to `H5Sclose'
/usr/bin/ld: nc4hdf.c:(.text+0x35d1): undefined reference to `H5Aclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `var_create_dataset':
nc4hdf.c:(.text+0x3666): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x366d): undefined reference to `H5P_CLS_DATASET_CREATE_ID_g'
/usr/bin/ld: nc4hdf.c:(.text+0x3678): undefined reference to `H5Pcreate'
/usr/bin/ld: nc4hdf.c:(.text+0x369d): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x36a4): undefined reference to `H5P_CLS_DATASET_ACCESS_ID_g'
/usr/bin/ld: nc4hdf.c:(.text+0x36af): undefined reference to `H5Pcreate'
/usr/bin/ld: nc4hdf.c:(.text+0x36e3): undefined reference to `H5Pset_obj_track_times'
/usr/bin/ld: nc4hdf.c:(.text+0x3761): undefined reference to `H5Pset_fill_time'
/usr/bin/ld: nc4hdf.c:(.text+0x37f2): undefined reference to `H5Pset_fill_value'
/usr/bin/ld: nc4hdf.c:(.text+0x3874): undefined reference to `H5Pset_fill_value'
/usr/bin/ld: nc4hdf.c:(.text+0x3887): undefined reference to `H5Tclose'
/usr/bin/ld: nc4hdf.c:(.text+0x38b8): undefined reference to `H5Tclose'
/usr/bin/ld: nc4hdf.c:(.text+0x38eb): undefined reference to `H5Pset_shuffle'
/usr/bin/ld: nc4hdf.c:(.text+0x392f): undefined reference to `H5Pset_deflate'
/usr/bin/ld: nc4hdf.c:(.text+0x39e1): undefined reference to `H5Pset_szip'
/usr/bin/ld: nc4hdf.c:(.text+0x3a39): undefined reference to `H5Pset_filter'
/usr/bin/ld: nc4hdf.c:(.text+0x3a77): undefined reference to `H5Pset_fletcher32'
/usr/bin/ld: nc4hdf.c:(.text+0x3eff): undefined reference to `H5Pset_layout'
/usr/bin/ld: nc4hdf.c:(.text+0x3f34): undefined reference to `H5Pset_chunk'
/usr/bin/ld: nc4hdf.c:(.text+0x3f69): undefined reference to `H5Screate_simple'
/usr/bin/ld: nc4hdf.c:(.text+0x3f93): undefined reference to `H5Screate'
/usr/bin/ld: nc4hdf.c:(.text+0x3fc7): undefined reference to `H5Pset_attr_creation_order'
/usr/bin/ld: nc4hdf.c:(.text+0x404d): undefined reference to `H5Pset_chunk_cache'
/usr/bin/ld: nc4hdf.c:(.text+0x40d0): undefined reference to `H5Dcreate2'
/usr/bin/ld: nc4hdf.c:(.text+0x414f): undefined reference to `H5DSset_scale'
/usr/bin/ld: nc4hdf.c:(.text+0x423d): undefined reference to `H5Tclose'
/usr/bin/ld: nc4hdf.c:(.text+0x4264): undefined reference to `H5Pclose'
/usr/bin/ld: nc4hdf.c:(.text+0x428b): undefined reference to `H5Pclose'
/usr/bin/ld: nc4hdf.c:(.text+0x42b2): undefined reference to `H5Sclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `commit_type':
nc4hdf.c:(.text+0x4443): undefined reference to `H5Tcreate'
/usr/bin/ld: nc4hdf.c:(.text+0x4552): undefined reference to `H5Tarray_create1'
/usr/bin/ld: nc4hdf.c:(.text+0x4572): undefined reference to `H5Tclose'
/usr/bin/ld: nc4hdf.c:(.text+0x4596): undefined reference to `H5Tclose'
/usr/bin/ld: nc4hdf.c:(.text+0x45e2): undefined reference to `H5Tinsert'
/usr/bin/ld: nc4hdf.c:(.text+0x45ff): undefined reference to `H5Tclose'
/usr/bin/ld: nc4hdf.c:(.text+0x46a8): undefined reference to `H5Tvlen_create'
/usr/bin/ld: nc4hdf.c:(.text+0x46f8): undefined reference to `H5Tcreate'
/usr/bin/ld: nc4hdf.c:(.text+0x47b2): undefined reference to `H5Tenum_create'
/usr/bin/ld: nc4hdf.c:(.text+0x4817): undefined reference to `H5Tenum_insert'
/usr/bin/ld: nc4hdf.c:(.text+0x4878): undefined reference to `H5Tcommit1'
/usr/bin/ld: nc4hdf.c:(.text+0x48a9): undefined reference to `H5Tget_native_type'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `write_nc3_strict_att':
nc4hdf.c:(.text+0x4939): undefined reference to `H5Aexists'
/usr/bin/ld: nc4hdf.c:(.text+0x4966): undefined reference to `H5Screate'
/usr/bin/ld: nc4hdf.c:(.text+0x497f): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x4986): undefined reference to `H5T_NATIVE_INT_g'
/usr/bin/ld: nc4hdf.c:(.text+0x49a6): undefined reference to `H5Acreate1'
/usr/bin/ld: nc4hdf.c:(.text+0x49bf): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x49c6): undefined reference to `H5T_NATIVE_INT_g'
/usr/bin/ld: nc4hdf.c:(.text+0x49dc): undefined reference to `H5Awrite'
/usr/bin/ld: nc4hdf.c:(.text+0x49fd): undefined reference to `H5Sclose'
/usr/bin/ld: nc4hdf.c:(.text+0x4a1b): undefined reference to `H5Aclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `create_group':
nc4hdf.c:(.text+0x4aa3): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x4aaa): undefined reference to `H5P_CLS_GROUP_CREATE_ID_g'
/usr/bin/ld: nc4hdf.c:(.text+0x4ab5): undefined reference to `H5Pcreate'
/usr/bin/ld: nc4hdf.c:(.text+0x4adb): undefined reference to `H5Pset_obj_track_times'
/usr/bin/ld: nc4hdf.c:(.text+0x4afc): undefined reference to `H5Pset_link_creation_order'
/usr/bin/ld: nc4hdf.c:(.text+0x4b1d): undefined reference to `H5Pset_attr_creation_order'
/usr/bin/ld: nc4hdf.c:(.text+0x4b5b): undefined reference to `H5Gcreate2'
/usr/bin/ld: nc4hdf.c:(.text+0x4b85): undefined reference to `H5Pclose'
/usr/bin/ld: nc4hdf.c:(.text+0x4bb5): undefined reference to `H5Gopen2'
/usr/bin/ld: nc4hdf.c:(.text+0x4bed): undefined reference to `H5Pclose'
/usr/bin/ld: nc4hdf.c:(.text+0x4c15): undefined reference to `H5Gclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `attach_dimscales':
nc4hdf.c:(.text+0x4da0): undefined reference to `H5DSattach_scale'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `var_exists':
nc4hdf.c:(.text+0x4e78): undefined reference to `H5Lexists'
/usr/bin/ld: nc4hdf.c:(.text+0x4eaa): undefined reference to `H5Gget_objinfo'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `remove_coord_atts':
nc4hdf.c:(.text+0x4f0b): undefined reference to `H5Aexists'
/usr/bin/ld: nc4hdf.c:(.text+0x4f3a): undefined reference to `H5Adelete'
/usr/bin/ld: nc4hdf.c:(.text+0x4f5e): undefined reference to `H5Aexists'
/usr/bin/ld: nc4hdf.c:(.text+0x4f8a): undefined reference to `H5Adelete'
/usr/bin/ld: nc4hdf.c:(.text+0x4fab): undefined reference to `H5Aexists'
/usr/bin/ld: nc4hdf.c:(.text+0x4fd7): undefined reference to `H5Adelete'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `write_var':
nc4hdf.c:(.text+0x5374): undefined reference to `H5DSdetach_scale'
/usr/bin/ld: nc4hdf.c:(.text+0x53d8): undefined reference to `H5Dclose'
/usr/bin/ld: nc4hdf.c:(.text+0x540e): undefined reference to `H5Gunlink'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `write_dim':
nc4hdf.c:(.text+0x561f): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x5626): undefined reference to `H5P_CLS_DATASET_CREATE_ID_g'
/usr/bin/ld: nc4hdf.c:(.text+0x5631): undefined reference to `H5Pcreate'
/usr/bin/ld: nc4hdf.c:(.text+0x5665): undefined reference to `H5Pset_obj_track_times'
/usr/bin/ld: nc4hdf.c:(.text+0x56d0): undefined reference to `H5Pset_chunk'
/usr/bin/ld: nc4hdf.c:(.text+0x56fe): undefined reference to `H5Screate_simple'
/usr/bin/ld: nc4hdf.c:(.text+0x5732): undefined reference to `H5Pset_attr_creation_order'
/usr/bin/ld: nc4hdf.c:(.text+0x574a): undefined reference to `H5open'
/usr/bin/ld: nc4hdf.c:(.text+0x5751): undefined reference to `H5T_IEEE_F32BE_g'
/usr/bin/ld: nc4hdf.c:(.text+0x5783): undefined reference to `H5Dcreate1'
/usr/bin/ld: nc4hdf.c:(.text+0x57bc): undefined reference to `H5Sclose'
/usr/bin/ld: nc4hdf.c:(.text+0x57de): undefined reference to `H5Pclose'
/usr/bin/ld: nc4hdf.c:(.text+0x583f): undefined reference to `H5DSset_scale'
/usr/bin/ld: nc4hdf.c:(.text+0x5abd): undefined reference to `H5Dset_extent'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `nc4_rec_match_dimscales.localalias':
nc4hdf.c:(.text+0x9e8d): undefined reference to `H5Dget_space'
/usr/bin/ld: nc4hdf.c:(.text+0x9f4f): undefined reference to `H5Sget_simple_extent_dims'
/usr/bin/ld: nc4hdf.c:(.text+0x9fcf): undefined reference to `H5Sget_simple_extent_type'
/usr/bin/ld: nc4hdf.c:(.text+0x9fec): undefined reference to `H5Sclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `reportobject':
nc4hdf.c:(.text+0xa62d): undefined reference to `H5Iget_name'
/usr/bin/ld: nc4hdf.c:(.text+0xa6f9): undefined reference to `H5Aget_name'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `reportopenobjectsT':
nc4hdf.c:(.text+0xa7f8): undefined reference to `H5Fget_obj_count'
/usr/bin/ld: nc4hdf.c:(.text+0xa85c): undefined reference to `H5Fget_obj_ids'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `NC4_hdf5get_libversion':
nc4hdf.c:(.text+0xa92f): undefined reference to `H5get_libversion'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `NC4_hdf5get_superblock':
nc4hdf.c:(.text+0xa983): undefined reference to `H5Fget_create_plist'
/usr/bin/ld: nc4hdf.c:(.text+0xa9b7): undefined reference to `H5Pget_version'
/usr/bin/ld: nc4hdf.c:(.text+0xa9ec): undefined reference to `H5Pclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `NC4_get_strict_att':
nc4hdf.c:(.text+0xaae5): undefined reference to `H5Aopen_name'
/usr/bin/ld: nc4hdf.c:(.text+0xaaf5): undefined reference to `H5Aclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4hdf.o): in function `NC4_walk':
nc4hdf.c:(.text+0xab4a): undefined reference to `H5Gget_num_objs'
/usr/bin/ld: nc4hdf.c:(.text+0xab97): undefined reference to `H5Gget_objname_by_idx'
/usr/bin/ld: nc4hdf.c:(.text+0xabcf): undefined reference to `H5Gget_objtype_by_idx'
/usr/bin/ld: nc4hdf.c:(.text+0xac05): undefined reference to `H5Gopen1'
/usr/bin/ld: nc4hdf.c:(.text+0xac34): undefined reference to `H5Gclose'
/usr/bin/ld: nc4hdf.c:(.text+0xac84): undefined reference to `H5Dopen1'
/usr/bin/ld: nc4hdf.c:(.text+0xac9a): undefined reference to `H5Aget_num_attrs'
/usr/bin/ld: nc4hdf.c:(.text+0xacc6): undefined reference to `H5Aopen_idx'
/usr/bin/ld: nc4hdf.c:(.text+0xacf6): undefined reference to `H5Aget_name'
/usr/bin/ld: nc4hdf.c:(.text+0xad7e): undefined reference to `H5Aclose'
/usr/bin/ld: nc4hdf.c:(.text+0xada6): undefined reference to `H5Dclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4info.o): in function `NC4_get_propattr':
nc4info.c:(.text+0x3bc): undefined reference to `H5Aexists'
/usr/bin/ld: nc4info.c:(.text+0x3da): undefined reference to `H5Aopen_name'
/usr/bin/ld: nc4info.c:(.text+0x3ea): undefined reference to `H5Aget_space'
/usr/bin/ld: nc4info.c:(.text+0x3fa): undefined reference to `H5Aget_type'
/usr/bin/ld: nc4info.c:(.text+0x40a): undefined reference to `H5Tget_class'
/usr/bin/ld: nc4info.c:(.text+0x42b): undefined reference to `H5Tget_size'
/usr/bin/ld: nc4info.c:(.text+0x46f): undefined reference to `H5Tget_native_type'
/usr/bin/ld: nc4info.c:(.text+0x49a): undefined reference to `H5Aread'
/usr/bin/ld: nc4info.c:(.text+0x4ec): undefined reference to `H5Aclose'
/usr/bin/ld: nc4info.c:(.text+0x50c): undefined reference to `H5Sclose'
/usr/bin/ld: nc4info.c:(.text+0x52c): undefined reference to `H5Tclose'
/usr/bin/ld: nc4info.c:(.text+0x54c): undefined reference to `H5Tclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4info.o): in function `NC4_put_propattr':
nc4info.c:(.text+0x5e5): undefined reference to `H5Aexists'
/usr/bin/ld: nc4info.c:(.text+0x627): undefined reference to `H5open'
/usr/bin/ld: nc4info.c:(.text+0x62e): undefined reference to `H5T_C_S1_g'
/usr/bin/ld: nc4info.c:(.text+0x639): undefined reference to `H5Tcopy'
/usr/bin/ld: nc4info.c:(.text+0x661): undefined reference to `H5Tset_cset'
/usr/bin/ld: nc4info.c:(.text+0x690): undefined reference to `H5Tset_size'
/usr/bin/ld: nc4info.c:(.text+0x6a7): undefined reference to `H5Screate'
/usr/bin/ld: nc4info.c:(.text+0x6dc): undefined reference to `H5Acreate1'
/usr/bin/ld: nc4info.c:(.text+0x707): undefined reference to `H5Awrite'
/usr/bin/ld: nc4info.c:(.text+0x748): undefined reference to `H5Aclose'
/usr/bin/ld: nc4info.c:(.text+0x768): undefined reference to `H5Sclose'
/usr/bin/ld: nc4info.c:(.text+0x788): undefined reference to `H5Tclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4internal.o): in function `set_auto':
nc4internal.c:(.text+0x25): undefined reference to `H5Eset_auto2'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4internal.o): in function `find_var_dim_max_length':
nc4internal.c:(.text+0x2ae): undefined reference to `H5Dget_space'
/usr/bin/ld: nc4internal.c:(.text+0x2d1): undefined reference to `H5Sget_simple_extent_type'
/usr/bin/ld: nc4internal.c:(.text+0x318): undefined reference to `H5Sget_simple_extent_ndims'
/usr/bin/ld: nc4internal.c:(.text+0x3ac): undefined reference to `H5Sget_simple_extent_dims'
/usr/bin/ld: nc4internal.c:(.text+0x430): undefined reference to `H5Sclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4internal.o): in function `nc4_rec_find_hdf_type.localalias':
nc4internal.c:(.text+0xcdb): undefined reference to `H5Tequal'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4internal.o): in function `nc4_type_free':
nc4internal.c:(.text+0x1d51): undefined reference to `H5Tclose'
/usr/bin/ld: nc4internal.c:(.text+0x1d7c): undefined reference to `H5Tclose'
/usr/bin/ld: nc4internal.c:(.text+0x1e77): undefined reference to `H5Tclose'
/usr/bin/ld: nc4internal.c:(.text+0x1e92): undefined reference to `H5Tclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4internal.o): in function `nc4_rec_grp_del.localalias':
nc4internal.c:(.text+0x2331): undefined reference to `H5Dclose'
/usr/bin/ld: nc4internal.c:(.text+0x242a): undefined reference to `H5Dclose'
/usr/bin/ld: nc4internal.c:(.text+0x24e4): undefined reference to `H5Gclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4internal.o): in function `nc4_att_list_del':
nc4internal.c:(.text+0x2597): undefined reference to `H5Tclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4internal.o): in function `delete_existing_dimscale_dataset':
nc4internal.c:(.text+0x2887): undefined reference to `H5Dclose'
/usr/bin/ld: nc4internal.c:(.text+0x28b9): undefined reference to `H5Gunlink'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4internal.o): in function `nc4_reform_coord_var':
nc4internal.c:(.text+0x2a0c): undefined reference to `H5DSdetach_scale'
/usr/bin/ld: nc4internal.c:(.text+0x2aee): undefined reference to `H5Dclose'
/usr/bin/ld: nc4internal.c:(.text+0x2b25): undefined reference to `H5Gunlink'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4type.o): in function `NC4_inq_type_equal':
nc4type.c:(.text+0x172): undefined reference to `H5Tequal'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4var.o): in function `nc4_reopen_dataset':
nc4var.c:(.txt+0x26): undefined reference to `H5open'
/usr/bin/ld: nc4var.c:(.text+0x2d): undefined reference to `H5P_CLS_DATASET_ACCESS_ID_g'
/usr/bin/ld: nc4var.c:(.text+0x38): undefined reference to `H5Pcreate'
/usr/bin/ld: nc4var.c:(.text+0x90): undefined reference to `H5Pset_chunk_cache'
/usr/bin/ld: nc4var.c:(.text+0xab): undefined reference to `H5Dclose'
/usr/bin/ld: nc4var.c:(.text+0xd4): undefined reference to `H5Dopen2'
/usr/bin/ld: nc4var.c:(.text+0xfc): undefined reference to `H5Pclose'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4var.o): in function `NC4_def_var':
nc4var.c:(.text+0x12bc): undefined reference to `H5Tget_native_type'
/usr/bin/ld: nc4var.c:(.text+0x1346): undefined reference to `H5Tget_class'
/usr/bin/ld: nc4var.c:(.text+0x1741): undefined reference to `H5Dclose'
/usr/bin/ld: nc4var.c:(.text+0x1784): undefined reference to `H5Gunlink'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4var.o): in function `NC4_rename_var':
nc4var.c:(.text+0x3327): undefined reference to `H5Gmove'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4attr.o): in function `NC4_rename_att':
nc4attr.c:(.text+0x10f1): undefined reference to `H5Adelete'
/usr/bin/ld: nc4attr.c:(.text+0x1154): undefined reference to `H5Adelete'
/usr/bin/ld: /root/lib/libnetcdf.a(libnetcdf4_la-nc4attr.o): in function `NC4_del_att':
nc4attr.c:(.text+0x149a): undefined reference to `H5Adelete'
/usr/bin/ld: nc4attr.c:(.text+0x1507): undefined reference to `H5Dclose'
collect2: error: ld returned 1 exit status
make[2]: *** [CMakeFiles/easicube.dir/build.make:111：easicube] 错误 1
make[1]: *** [CMakeFiles/Makefile2:111：CMakeFiles/easicube.dir/all] 错误 2
make: *** [Makefile:136：all] 错误

PS: 可有偿安装(v crarook)

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